Fitness data for BPHYT_RS12305 in Burkholderia phytofirmans PsJN

Malate synthase (EC 2.3.3.9) (from data)
Original annotation: malate synthase
SEED: Malate synthase (EC 2.3.3.9)
KEGG: malate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Tween 20 (C) -2.6 -7.0 compare
phage 36hr PHYTO6 MOI 1 -0.6 -2.9 compare
nophagecontrol 24hr Phyto Lib Only -0.6 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -2.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.5 -2.6 compare
phage 36hr PHYTO7 MOI 0.1 -0.5 -2.6 compare
phage 36hr PHYTO4 MOI 1 -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.0 compare
phage 36hr PHYTO1 MOI 1 -0.4 -2.7 compare
phage 24hr PHYTO6 MOI 0.1 -0.4 -2.0 compare
phage 24hr PHYTO7 MOI 1 -0.4 -1.6 compare
phage 24hr PHYTO4 MOI 10 -0.4 -1.5 compare
phage 36hr PHYTO3 MOI 1 -0.4 -1.7 compare
phage 36hr PHYTO1 MOI 10 -0.4 -1.9 compare
phage 36hr PHYTO9 MOI 0.1 -0.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.8 compare
nitrogen source Putrescine (N) +0.4 +2.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.1 compare