Fitness data for BPHYT_RS11810 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: D-serine dehydratase transcriptional activator
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -3.4 -1.1 compare
vitamin With vitamins t2 -2.2 -2.0 compare
phage 24hr PHYTO10 MOI 10 -2.1 -1.6 compare
phage 24hr PHYTO6 MOI 10 -2.0 -1.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.7 -1.0 compare
phage 36hr PHYTO8 MOI 10 -1.5 -1.3 compare
phage 36hr PHYTO1 MOI 1 -1.5 -1.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.5 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.4 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -0.9 compare
carbon source D-Fructose (C) -1.4 -2.0 compare
nophagecontrol 36hr Phyto Lib only -1.3 -0.9 compare
nitrogen source NAG (N) +1.5 +2.7 compare
phage P. phyto corn MOI 0.1 +1.5 +2.8 compare
supernatant control Vogels_fungal_media 0.1X +1.5 +1.7 compare
nutrient L-Histidine +1.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +3.5 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.6 +2.6 compare