Fitness data for BPHYT_RS10950 in Burkholderia phytofirmans PsJN

transcriptional regulator
SEED: Transcriptional regulator KdgR, KDG operon repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 36hr PHYTO9 MOI 0.1 -1.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.4 -3.4 compare
phage P. phyto PHYTO2 MOI 1 -1.4 -1.8 compare
phage 24hr PHYTO1 MOI 10 -1.3 -1.9 compare
nophagecontrol 24hr Phyto Lib Only -1.1 -1.6 compare
phage 36hr PHYTO11 MOI 1 -0.9 -1.3 compare
phage 24hr PHYTO10 MOI 1 -0.9 -1.4 compare
carbon source L-Alanine (C) -0.9 -2.1 compare
carbon source L-Tryptophan (C) -0.8 -2.3 compare
phage 24hr PHYTO3 MOI 0.1 -0.8 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.8 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.7 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.9 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.2 compare
phage 36hr PHYTO2 MOI 1 +1.0 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.0 +1.8 compare
phage 36hr PHYTO10 MOI 10 +1.0 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.1 +2.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +10.0 +37.1 compare