Fitness data for BPHYT_RS10600 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.1 compare
phage P. phyto corn MOI 1 -1.0 -1.5 compare
phage 24hr PHYTO8 MOI 1 -0.8 -2.2 compare
phage 36hr PHYTO2 MOI 1 -0.8 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.8 -1.6 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.6 -2.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.6 -1.0 compare
phage 24hr PHYTO3 MOI 10 +0.6 +1.1 compare
phage 36hr PHYTO3 MOI 1 +0.6 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.6 +1.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.6 +1.1 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.7 +1.8 compare
carbon source Protocatechuic Acid (C) +0.7 +1.7 compare
phage 24hr PHYTO2 MOI 0.1 +0.7 +1.6 compare
phage 24hr PHYTO2 MOI 1 +0.8 +1.8 compare
phage 36hr PHYTO11 MOI 0.1 +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.3 compare
motility outer cut, LB soft agar motility assay +1.1 +2.4 compare