Fitness data for BPHYT_RS09040 in Burkholderia phytofirmans PsJN

MerR family transcriptional regulator
SEED: transcription regulator, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 36hr PHYTO2 MOI 1 -1.1 -2.1 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -1.1 -1.3 compare
phage 24hr PHYTO6 MOI 10 -1.1 -1.6 compare
phage 24hr PHYTO2 MOI 0.1 -1.0 -2.3 compare
phage 36hr PHYTO9 MOI 1 -1.0 -2.5 compare
phage 36hr PHYTO1 MOI 1 -1.0 -1.2 compare
phage 36hr PHYTO1 MOI 10 -0.9 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.9 -1.1 compare
carbon source Protocatechuic Acid (C) -0.8 -2.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.8 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.8 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.0 compare
motility inner cut, LB soft agar motility assay +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.9 +1.5 compare
carbon source Phenylacetic 5 mM (C) +1.0 +2.0 compare
vitamin No vitamins t1 +1.0 +2.7 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.0 +2.0 compare
phage 24hr PHYTO3 MOI 10 +1.2 +2.8 compare