Fitness data for BPHYT_RS09015 in Burkholderia phytofirmans PsJN

multidrug transporter MatE
SEED: Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog
KEGG: multidrug resistance protein, MATE family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.1 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.4 -2.0 compare
phage 36hr PHYTO2 MOI 1 -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
phage 36hr PHYTO1 MOI 10 -0.3 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -2.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.3 -1.4 compare
phage 24hr PHYTO10 MOI 1 -0.3 -1.6 compare
phage 36hr PHYTO7 MOI 1 -0.3 -1.7 compare
nophagecontrol 36hr Phyto Lib Only -0.3 -1.6 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.3 -1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +2.0 compare
carbon source D-Xylose (C) +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.6 compare
vitamin No vitamins t1 +0.4 +2.3 compare
vitamin With vitamins t1 +0.4 +2.2 compare
stress Dimethyl Sulfoxide 6 vol% +0.5 +3.1 compare