Fitness data for BPHYT_RS07295 in Burkholderia phytofirmans PsJN

porin
SEED: outer membrane protein (porin)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -0.8 -2.4 compare
nophagecontrol 36hr Phyto Lib only -0.8 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.8 -1.3 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.7 -1.5 compare
nitrogen source NAG (N) -0.6 -2.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.8 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.6 -1.5 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.6 -1.1 compare
phage 24hr PHYTO2 MOI 0.1 -0.6 -1.7 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.6 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.6 compare
phage 36hr PHYTO3 MOI 0.1 -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.3 compare
motility inner cut, LB soft agar motility assay -0.5 -2.0 compare
nitrogen source L-Lysine (N) +0.6 +1.1 compare
vitamin With vitamins t1 +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.8 compare
phage P. phyto PHYTO2 MOI 1 +1.1 +3.4 compare