Fitness data for BPHYT_RS07100 in Burkholderia phytofirmans PsJN

isovaleryl-CoA dehydrogenase
SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.9 -3.3 compare
carbon source Disodium Glutarate (C) -0.7 -3.6 compare
phage 24hr PHYTO9 MOI 10 -0.7 -2.9 compare
phage P. phyto PHYTO2 MOI 1 -0.6 -2.0 compare
phage 24hr PHYTO3 MOI 10 -0.6 -1.6 compare
phage 24hr PHYTO10 MOI 1 -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.2 compare
carbon source Disodium Glutarate (C) -0.5 -1.7 compare
carbon source L-Fucose (C) -0.5 -1.6 compare
phage 36hr PHYTO8 MOI 0.1 -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.4 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -1.5 compare
phage 36hr PHYTO7 MOI 1 -0.4 -1.7 compare
phage 36hr PHYTO8 MOI 10 +0.4 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.3 compare