Fitness data for BPHYT_RS06800 in Burkholderia phytofirmans PsJN

XRE family transcriptional regulator
SEED: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 24hr PHYTO4 MOI 10 -0.7 -2.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.8 compare
carbon source D-Glucose (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.4 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -1.6 compare
phage 24hr PHYTO10 MOI 10 -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.2 compare
phage 24hr PHYTO3 MOI 10 +0.3 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.7 compare
nitrogen source L-Phenylalanine (N) +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.7 compare
phage 24hr PHYTO1 MOI 1 +0.4 +1.4 compare
nitrogen source L-Serine (N) +0.4 +1.7 compare
tn7 efficiency Outgrowth after Tn7 transformation +0.4 +3.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.5 +1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.5 +2.0 compare