Fitness data for BPHYT_RS05235 in Burkholderia phytofirmans PsJN

bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase
SEED: Uroporphyrinogen-III synthase (EC 4.2.1.75) / Homolog of E. coli HemX protein
KEGG: uroporphyrinogen III methyltransferase / synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -2.3 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.8 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -1.1 compare
stress A22 0.005 mg/ml -1.6 -1.5 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.6 -1.0 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -1.5 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.1 compare
phage 24hr PHYTO10 MOI 1 -1.3 -1.1 compare
phage 24hr PHYTO9 MOI 0.1 -1.3 -1.1 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -0.9 compare
carbon source 2-Deoxy-D-Ribose (C) +1.2 +2.1 compare
nutrient Min media with glucose +1.3 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.5 +2.0 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.5 +1.6 compare
nitrogen source L-Glutamic (N) +1.6 +1.9 compare
phage 24hr PHYTO6 MOI 10 +1.7 +2.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +1.7 +3.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +2.1 +3.0 compare