Fitness data for BPHYT_RS04885 in Burkholderia phytofirmans PsJN

threonine-phosphate decarboxylase
SEED: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
KEGG: cobalamin biosynthetic protein CobC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
phage 24hr PHYTO6 MOI 0.1 -3.0 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -2.3 -2.1 compare
phage 24hr PHYTO6 MOI 10 -2.2 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.2 -2.6 compare
phage 36hr PHYTO11 MOI 1 -1.8 -1.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.8 -1.5 compare
phage 36hr PHYTO6 MOI 1 -1.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -2.3 compare
phage 24hr PHYTO11 MOI 1 -1.4 -1.5 compare
carbon source Gly-Glu (C) -1.4 -1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.4 -2.2 compare
motility outer cut, LB soft agar motility assay -1.3 -1.6 compare
phage 36hr PHYTO MOI 0.1 -1.3 -1.4 compare
motility outer cut, LB soft agar motility assay -1.3 -2.1 compare
phage 36hr PHYTO7 MOI 1 -1.3 -1.3 compare
phage 24hr PHYTO11 MOI 0.1 +1.3 +3.0 compare
phage 36hr PHYTO2 MOI 0.1 +1.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.9 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +3.4 compare