Fitness data for BPHYT_RS04700 in Burkholderia phytofirmans PsJN

AP endonuclease
SEED: Inosose isomerase (EC 5.3.99.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Glucose (C) -0.4 -3.0 compare
phage 36hr PHYTO8 MOI 0.1 -0.4 -1.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.3 -1.5 compare
carbon source D-Glucose (C) -0.3 -1.7 compare
phage 36hr PHYTO9 MOI 0.1 -0.3 -1.5 compare
phage 24hr PHYTO MOI 0.1 -0.3 -1.7 compare
carbon source Phenylacetic 5 mM (C) -0.3 -1.9 compare
phage 36hr PHYTO11 MOI 1 -0.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3 +1.7 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.4 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.3 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.7 compare