Fitness data for BPHYT_RS04640 in Burkholderia phytofirmans PsJN

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Urea ABC transporter, urea binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.9 -2.4 compare
nitrogen source L-Lysine (N) -0.7 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.6 -2.5 compare
nitrogen source Carnitine Hydrochloride (N) -0.6 -2.7 compare
carbon source D-Glucose (C) -0.5 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 -1.6 compare
stress Paraquat dichloride 0.032 mg/ml -0.4 -1.4 compare
phage 24hr PHYTO3 MOI 1 +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.3 compare
phage 36hr PHYTO1 MOI 1 +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.5 +2.6 compare
pH LB, pH7 +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.3 compare
phage P. phyto PHYTO2 MOI 1 +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +1.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.4 compare