Fitness data for BPHYT_RS04600 in Burkholderia phytofirmans PsJN

type VI secretion protein
SEED: Protein ImpG/VasA
KEGG: type VI secretion system protein ImpG

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 24hr PHYTO4 MOI 10 -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.9 compare
phage 36hr PHYTO2 MOI 0.1 -0.4 -2.1 compare
phage 24hr PHYTO9 MOI 0.1 -0.3 -2.2 compare
stress Paraquat dichloride 0.032 mg/ml -0.3 -2.0 compare
motility inner cut, LB soft agar motility assay -0.3 -1.5 compare
phage 36hr PHYTO6 MOI 10 -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.6 compare
phage 24hr PHYTO3 MOI 10 -0.3 -1.3 compare
nitrogen source L-Glutamine (N) +0.3 +2.0 compare
vitamin With vitamins t1 +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.5 compare