Fitness data for BPHYT_RS04570 in Burkholderia phytofirmans PsJN

EvpB family type VI secretion protein
SEED: Uncharacterized protein ImpC
KEGG: type VI secretion system protein ImpC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.9 compare
phage 24hr PHYTO9 MOI 10 -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.8 compare
phage 24hr PHYTO3 MOI 10 -0.5 -1.3 compare
carbon source D-Glucose (C) -0.4 -2.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.4 -1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.6 compare
phage 24hr PHYTO11 MOI 0.1 -0.4 -1.6 compare
stress A22 0.005 mg/ml -0.4 -1.8 compare
phage 24hr PHYTO8 MOI 1 -0.4 -1.6 compare
phage 24hr PHYTO1 MOI 10 -0.4 -1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.7 compare
phage 24hr PHYTO2 MOI 1 -0.4 -1.3 compare
carbon source succinate (C) -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.0 compare
nophagecontrol 36hr Phyto Lib Only +0.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.6 compare
carbon source Phenylacetic 5 mM (C) +0.6 +2.2 compare