Fitness data for BPHYT_RS04550 in Burkholderia phytofirmans PsJN

type VI secretion protein
SEED: Uncharacterized protein ImpJ/VasE
KEGG: type VI secretion system protein ImpJ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -1.4 compare
phage 24hr PHYTO11 MOI 1 -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 -1.8 compare
phage 36hr PHYTO4 MOI 1 -0.4 -1.6 compare
phage 36hr PHYTO7 MOI 0.1 -0.4 -2.1 compare
nophagecontrol 36hr Phyto Lib only -0.4 -1.3 compare
phage 36hr PHYTO1 MOI 1 -0.4 -1.8 compare
temperature LB, 37C -0.4 -1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.5 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.2 compare
carbon source L-Arabinose (C) +0.4 +2.1 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.1 compare
phage 36hr PHYTO2 MOI 1 +0.4 +1.3 compare
carbon source 2-Deoxy-D-Ribose (C) +0.4 +2.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.5 +2.1 compare