Fitness data for BPHYT_RS04545 in Burkholderia phytofirmans PsJN

membrane protein
SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
KEGG: type VI secretion system protein ImpK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage 24hr PHYTO4 MOI 0.1 -1.0 -1.9 compare
phage P. phyto corn MOI 0.1 -0.8 -3.0 compare
phage PHYTO3 MOI 0.1 -0.7 -2.0 compare
phage 36hr PHYTO6 MOI 0.1 -0.7 -1.7 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.7 -1.7 compare
phage 36hr PHYTO1 MOI 10 -0.7 -1.9 compare
phage 24hr PHYTO3 MOI 0.1 -0.7 -1.8 compare
phage 24hr PHYTO2 MOI 1 -0.6 -2.2 compare
phage 24hr PHYTO6 MOI 1 -0.6 -1.4 compare
phage 36hr PHYTO1 MOI 1 -0.6 -1.9 compare
phage 24hr PHYTO6 MOI 10 -0.6 -1.2 compare
phage 24hr PHYTO2 MOI 0.1 -0.6 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.5 compare
phage P. phyto corn MOI 1 -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
carbon source D-Glucose 20 mM (C) -0.5 -2.0 compare
phage 36hr PHYTO1 MOI 1 -0.5 -1.4 compare
phage 24hr PHYTO6 MOI 0.1 -0.5 -1.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.7 +1.1 compare