Fitness data for BPHYT_RS04155 in Burkholderia phytofirmans PsJN

polysaccharide deacetylase
SEED: Polysaccharide deacetylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
nitrogen source L-Lysine (N) -1.8 -2.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.2 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.3 compare
phage 36hr PHYTO MOI 0.1 -0.9 -2.4 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.9 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.4 compare
carbon source Malonic (C) +0.8 +1.4 compare
carbon source Suberic (C) +0.8 +1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.8 +2.1 compare
stress Paraquat dichloride 0.064 mg/ml +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.4 compare
phage 24hr PHYTO2 MOI 0.1 +0.9 +1.4 compare
motility outer cut, LB soft agar motility assay +0.9 +2.7 compare
phage 36hr PHYTO4 MOI 1 +0.9 +1.6 compare
motility outer cut, LB soft agar motility assay +1.0 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.1 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.6 +2.2 compare