Fitness data for BPHYT_RS03975 in Burkholderia phytofirmans PsJN

AraC family transcriptional regulator
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source L-Lysine (N) -0.7 -2.7 compare
phage 24hr PHYTO11 MOI 1 -0.7 -2.2 compare
phage 36hr PHYTO8 MOI 0.1 -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +1.6 compare
carbon source 2-Deoxy-D-Ribose (C) +0.5 +2.7 compare
no phage control No phage control +0.5 +2.1 compare
carbon source Trisodium citrate (C) +0.5 +2.5 compare
carbon source propionate (C) +0.5 +1.9 compare
carbon source Suberic (C) +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.2 compare
carbon source 2-Deoxy-D-Ribose (C) +0.6 +3.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.7 +2.0 compare
carbon source Tween 20 (C) +0.7 +2.5 compare
carbon source L-Fucose (C) +0.7 +3.3 compare
nitrogen source L-Isoleucine (N) +0.7 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.7 +3.6 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.9 +1.8 compare
carbon source D-Xylose (C) +1.3 +5.5 compare
carbon source Xylitol (C) +1.8 +8.9 compare