Fitness data for BPHYT_RS03920 in Burkholderia phytofirmans PsJN

lysine transporter LysE
SEED: Putative threonine efflux protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage 36hr PHYTO4 MOI 0.1 -0.8 -1.6 compare
phage 36hr PHYTO6 MOI 0.1 -0.8 -2.1 compare
carbon source Dodecandioic (C) -0.7 -1.7 compare
carbon source Malonic (C) -0.7 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -0.6 -2.3 compare
carbon source D-Glucose 20 mM (C) -0.6 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.0 compare
phage 36hr PHYTO4 MOI 1 -0.6 -1.2 compare
vitamin No vitamins t1 +0.6 +1.7 compare
carbon source 2-Deoxy-D-Ribose (C) +0.7 +2.3 compare
carbon source 2-Deoxy-D-Ribose (C) +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +2.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +1.8 compare