Fitness data for BPHYT_RS02425 in Burkholderia phytofirmans PsJN

hypothetical protein
SEED: Proposed lipoate regulatory protein YbeD
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Glucosamine Hydrochloride (C) -0.8 -2.7 compare
vitamin No vitamins t1 -0.7 -2.9 compare
carbon source D-Glucose 20 mM (C) -0.7 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.4 compare
phage 24hr PHYTO3 MOI 10 -0.7 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.6 +0.8 compare
nitrogen source L-Alanine (N) +0.6 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.4 compare
carbon source Sebacic (C) +0.6 +2.1 compare
carbon source D-Glucose (C) +0.6 +2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.7 +1.6 compare
motility outer cut, LB soft agar motility assay +0.7 +1.7 compare
phage 36hr PHYTO10 MOI 10 +0.7 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +0.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +2.0 compare