Fitness data for BPHYT_RS02085 in Burkholderia phytofirmans PsJN

methylmalonyl-CoA mutase
SEED: B12 binding domain / kinase domain / Methylmalonyl-CoA mutase (EC 5.4.99.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source L-Lysine (N) -0.4 -1.9 compare
phage 36hr PHYTO8 MOI 10 -0.4 -2.4 compare
phage 36hr PHYTO2 MOI 1 -0.3 -1.9 compare
phage 24hr PHYTO6 MOI 0.1 -0.3 -1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.3 -1.5 compare
phage 36hr PHYTO10 MOI 1 -0.3 -2.0 compare
phage 36hr PHYTO MOI 0.1 -0.3 -1.9 compare
phage 36hr PHYTO10 MOI 10 -0.3 -1.8 compare
carbon source 2-Deoxy-D-Ribose (C) +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.8 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.1 compare