Fitness data for BPHYT_RS01790 in Burkholderia phytofirmans PsJN

LuxR family transcriptional regulator
SEED: Two-component response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -4.8 -11.5 compare
motility outer cut, LB soft agar motility assay -4.5 -11.9 compare
motility inner cut, LB soft agar motility assay -3.1 -15.4 compare
motility inner cut, LB soft agar motility assay -2.9 -11.3 compare
motility inner cut, LB soft agar motility assay -2.5 -13.8 compare
motility outer cut, LB soft agar motility assay -2.3 -10.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -6.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.4 +11.2 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +13.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +7.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +5.4 compare
carbon source Malonic (C) +1.5 +11.3 compare
stress Bacitracin 0.125 mg/ml +1.5 +14.5 compare
stress Nickel (II) chloride 0.5 mM +1.6 +11.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.7 +9.8 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.8 +14.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.8 +9.4 compare
carbon source Malonic (C) +1.9 +14.6 compare
stress Paraquat dichloride 0.064 mg/ml +2.4 +17.9 compare
stress Bacitracin 0.25 mg/ml +3.3 +25.5 compare