Fitness data for BPHYT_RS00890 in Burkholderia phytofirmans PsJN

membrane protein
SEED: Outer membrane protein (porin)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.6 compare
phage P. phyto corn MOI 1 -0.6 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -2.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.3 compare
phage 24hr PHYTO6 MOI 10 -0.4 -1.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.4 -1.9 compare
phage 24hr PHYTO2 MOI 0.1 -0.3 -1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.3 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.8 compare
nitrogen source Putrescine (N) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.3 compare
phage 36hr PHYTO9 MOI 1 +0.4 +2.1 compare
carbon source D-Xylose (C) +0.4 +2.4 compare
motility inner cut, LB soft agar motility assay +0.5 +2.7 compare