Fitness data for BPHYT_RS00820 in Burkholderia phytofirmans PsJN

type IV secretory pathway protein VirD4
SEED: Type IV secretion system protein VirD4
KEGG: type IV secretion system protein VirD4

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.0 compare
carbon source D-Glucose (C) -0.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
carbon source Gly-Glu (C) -0.3 -1.8 compare
carbon source adipate (C) -0.3 -1.6 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 -1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.4 +2.1 compare
r2a control R2A control +0.4 +2.2 compare
phage 36hr PHYTO1 MOI 10 +0.4 +1.8 compare
stress Paraquat dichloride 0.064 mg/ml +0.5 +2.7 compare
motility outer cut, LB soft agar motility assay +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +3.2 compare