Fitness data for BPHYT_RS00410 in Burkholderia phytofirmans PsJN

LacI family transcription regulator
SEED: Gluconate utilization system Gnt-I transcriptional repressor
KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.6 -2.4 compare
nitrogen source L-Lysine (N) -0.6 -2.5 compare
carbon source Phenylacetic 5 mM (C) -0.5 -2.2 compare
nitrogen source Carnitine Hydrochloride (N) -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.3 compare
nitrogen source L-Glutamine (N) -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -1.0 compare
nitrogen source L-Alanine (N) -0.3 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.0 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.3 +1.2 compare
carbon source D-Lactate (C) +0.3 +1.6 compare
phage 24hr PHYTO4 MOI 10 +0.3 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +1.6 compare
carbon source Dodecandioic (C) +0.4 +1.8 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.2 compare