Fitness data for BPHYT_RS00260 in Burkholderia phytofirmans PsJN

amino acid ABC transporter
SEED: Urea ABC transporter, permease protein UrtB
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -1.9 compare
vitamin No vitamins t1 -0.6 -2.3 compare
vitamin With vitamins t2 -0.5 -2.0 compare
motility inner cut, LB soft agar motility assay -0.5 -2.1 compare
carbon source L-Arginine (C) -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.1 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.5 -1.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +1.2 compare
carbon source Malonic (C) +0.5 +1.2 compare
carbon source adipate (C) +0.5 +1.9 compare
phage 24hr PHYTO2 MOI 0.1 +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.4 compare
carbon source L-Phenylalanine (C) +0.6 +2.4 compare
phage 36hr PHYTO11 MOI 0.1 +0.6 +2.3 compare
phage 36hr PHYTO2 MOI 0.1 +0.6 +2.4 compare
phage 36hr PHYTO6 MOI 10 +0.7 +2.5 compare