Fitness data for BBR_RS16250 in Bifidobacterium breve UCC2003

tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
SEED: TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.5)


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group condition fitness t score  
chicken chicken 1; day 2; diet=StandardDiet; sample=FecalPellet -5.7 -3.9 compare
mouse coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -5.2 -6.2 compare
nutrient dropout control CDM1 -4.7 -5.6 compare
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -4.6 -3.2 compare
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day1 -4.4 -4.6 compare
mouse preculture cage3; mouse2; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -4.4 -4.3 compare
nutrient dropout control CDM1 -4.2 -5.1 compare
nutrient dropout CDM1 without Asparagine -4.2 -4.7 compare
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -4.2 -2.9 compare
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -4.1 -4.0 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day1 -4.1 -4.4 compare
chicken coculture chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -4.0 -2.8 compare
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day4 -3.9 -3.0 compare
mouse preculture cage3; mouse1; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -3.8 -4.0 compare
mouse preculture cage3; mouse3; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -3.8 -4.4 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3 -3.8 -2.5 compare
mouse coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -3.6 -4.9 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day2 -3.5 -2.5 compare
chicken chicken 3; day 2; diet=StandardDiet; sample=FecalPellet -3.5 -4.6 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day2 -3.5 -3.5 compare