Fitness data for BBR_RS15930 in Bifidobacterium breve UCC2003

RNA polymerase sigma factor
SEED: RNA polymerase ECF-type sigma factor, putative
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Recovery broth with Thioridazine 0.1 mM -1.9 -2.6 compare
mouse preculture cage3; mouse1; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -1.3 -1.9 compare
stress Recovery broth with Gentamicin 0.4 mM -1.2 -3.3 compare
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 -1.0 -2.2 compare
nutrient dropout CDM1 with Glycine Histidine Proline as the only aminos -1.0 -3.8 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 -0.8 -1.8 compare
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet -0.8 -1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6 -0.6 -0.8 compare
stress Recovery broth with Nitrofurantoin 0.05 mM +0.6 +1.3 compare
mrs timecourse MRS Time48hr +0.6 +1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day3 +0.6 +2.3 compare
stress timecourse MRS + kanamycin Time48hr +0.6 +1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 +0.7 +1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day2 +0.7 +2.9 compare
stress timecourse MRS + kanamycin Time24hr +0.8 +2.1 compare
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.8 +2.1 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 +0.8 +1.6 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3 +0.9 +2.7 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3 +1.0 +2.3 compare
mrs timecourse MRS Time48hr +1.1 +2.6 compare