Fitness data for BBR_RS15520 in Bifidobacterium breve UCC2003

shikimate 5-dehydrogenase
SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
KEGG: shikimate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.5)


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group condition fitness t score  
mouse coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -5.5 -3.8 compare
mouse coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -5.2 -3.6 compare
nutrient dropout CDM1 without FolicAcid -5.2 -5.1 compare
mouse coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -5.0 -3.4 compare
mouse mouse 3; day 1; diet=StandardDiet; sample=FecalPellet -5.0 -3.5 compare
nutrient dropout CDM1 without FolicAcid -5.0 -5.9 compare
mouse mouse 4; day 1; diet=StandardDiet; sample=FecalPellet -5.0 -3.4 compare
mouse mouse 16; day 1; diet=StandardDiet_Methotrexate; sample=FecalPellet -4.9 -3.4 compare
mouse mouse 18; day 1; diet=StandardDiet_Methotrexate; sample=FecalPellet -4.9 -3.4 compare
mouse mouse 11; day 1; diet=HighFatHighSugar; sample=FecalPellet -4.9 -2.9 compare
mouse mouse 12; day 1; diet=HighFatHighSugar; sample=FecalPellet -4.8 -3.6 compare
nutrient dropout control CDM1 -4.6 -6.3 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day1 -4.6 -3.2 compare
stress Recovery broth with Loratadine 0.5 mM -4.6 -3.2 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day1 -4.6 -3.2 compare
mouse coculture cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -4.6 -6.3 compare
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day1 -4.6 -3.2 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day2 -4.5 -3.1 compare
mouse coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -4.5 -6.2 compare
mouse coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -4.5 -4.4 compare