Fitness data for BBR_RS12340 in Bifidobacterium breve UCC2003

Arc family DNA-binding protein
SEED: VapB protein (antitoxin to VapC)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
chicken chicken 21; day 7; diet=StandardDiet; sample=Cecum -2.5 -2.0 compare
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -2.4 -1.2 compare
mouse preculture cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -1.9 -1.2 compare
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -1.8 -1.0 compare
stress Recovery broth with Ciprofloxacin 0.1 mM -1.7 -1.3 compare
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day4 -1.6 -1.5 compare
chicken chicken 5; day 6; diet=StandardDiet; sample=FecalPellet -1.6 -2.1 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4 -1.4 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 -1.4 -0.8 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 -1.4 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day5 -1.3 -1.0 compare
chicken chicken 5; day 7; diet=StandardDiet; sample=FecalPellet -1.2 -1.8 compare
mouse preculture cage3; mouse2; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -1.2 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 -1.2 -1.2 compare
mrs timecourse MRS Time6hr -1.1 -1.9 compare
stress Recovery broth with 5-(2-thienyl)-Pentanoic 2.7 mM -1.1 -2.6 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day5 -1.1 -1.0 compare
stress timecourse MRS + kanamycin Time48hr -1.1 -1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day4 -1.0 -1.2 compare
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -1.0 -1.1 compare