Fitness data for BBR_RS11340 in Bifidobacterium breve UCC2003

TetR/AcrR family transcriptional regulator
SEED: possible TetR-type transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Recovery broth with Streptomycin 0.3 mM -1.1 -4.2 compare
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day4 -0.8 -1.9 compare
stress timecourse MRS + carbenicillin Time48hr -0.7 -2.9 compare
nutrient dropout CDM1 without Isoleucine -0.6 -3.9 compare
nutrient dropout control CDM1 -0.6 -3.1 compare
nutrient dropout CDM1 without Leucine -0.6 -3.6 compare
nutrient dropout CDM1 without Methionine -0.6 -4.1 compare
nutrient dropout CDM1 without Pyridoxamine -0.6 -3.3 compare
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day4 -0.6 -1.9 compare
mouse preculture cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.6 -2.5 compare
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 -0.6 -2.0 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 -0.6 -2.3 compare
mouse preculture cage3; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.6 -2.6 compare
nutrient dropout control CDM1 -0.6 -3.2 compare
nutrient dropout CDM1 without Arginine -0.6 -3.1 compare
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day4 -0.6 -1.6 compare
nutrient dropout CDM1 without Cytosine -0.6 -2.7 compare
nutrient dropout CDM1 without Uracil -0.5 -2.4 compare
stress Recovery broth with Kanamycin sulfate 0.8 mM -0.5 -3.0 compare
stress Recovery broth with Ticarcillin 4e-04 mM +0.6 +2.0 compare