Fitness data for ABZR87_RS23355 in Ralstonia sp. UNC404CL21Col

diguanylate cyclase
SEED: diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
KEGG: two-component system, chemotaxis family, response regulator WspR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source Octanoic (C) -0.6 -2.3 compare
carbon source Sebacic (C) -0.4 -2.6 compare
soil soil EcoFAB sample 1; outgrowth in LB -0.3 -1.2 compare
carbon source propionate (C) -0.3 -2.0 compare
carbon source propionate (C) -0.3 -1.7 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.2 -1.6 compare
carbon source Valeric (C) -0.2 -1.3 compare
carbon source succinate (C) -0.2 -1.5 compare
carbon source Dodecandioic (C) -0.2 -1.3 compare
carbon source Sebacic (C) +0.2 +1.0 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.4 compare
root root sample 6; outgrowth in LB +0.2 +1.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.3 +1.2 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.3 +1.2 compare
root root sample 5; outgrowth in LB +0.3 +1.6 compare
soil soil sample 3; outgrowth in LB +0.4 +2.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +2.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +2.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.3 +18.2 compare