Fitness data for ABZR87_RS21085 in Ralstonia sp. UNC404CL21Col

glycoside hydrolase family 28 protein
SEED: Polygalacturonase (EC 3.2.1.15)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.3 -1.3 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.6 compare
root root sample 5; outgrowth in LB -0.2 -1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.1 compare
root root sample 4; outgrowth in LB +0.2 +1.2 compare
carbon source succinate (C) +0.2 +1.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +1.3 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.2 +1.3 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.2 +1.4 compare
carbon source Protocatechuic Acid (C) +0.2 +1.4 compare
rhizosphere rhizosphere sample 9; outgrowth in LB +0.2 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.7 compare
carbon source Lauric (C) +0.2 +1.7 compare
carbon source Octanoic (C) +0.2 +1.2 compare
nitrogen source nitrogen source nitrite 0.5mM +0.2 +1.4 compare
root root EcoFAB sample 2; outgrowth in LB +0.2 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.3 compare
root root sample 6; outgrowth in LB +0.3 +1.7 compare
carbon source Sebacic (C) +0.3 +1.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +2.0 compare