Fitness data for ABZR87_RS20850 in Ralstonia sp. UNC404CL21Col

homogentisate 1,2-dioxygenase
SEED: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
KEGG: homogentisate 1,2-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -1.8 -2.7 compare
root root EcoFAB sample 1; outgrowth in LB -1.2 -4.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.1 -4.0 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -1.0 -2.9 compare
root root sample 6; outgrowth in LB -0.9 -2.9 compare
soil soil EcoFAB sample 1; outgrowth in LB -0.7 -2.0 compare
micoeukaryotes C.elegans, mixed culture-2 -0.6 -2.6 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.5 -2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 -2.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.4 -1.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.4 -1.6 compare
carbon source Lauric (C) -0.4 -1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.3 compare
carbon source Protocatechuic Acid (C) +0.4 +2.1 compare
phage Ra3_1 +0.4 +1.9 compare
carbon source Protocatechuic Acid (C) +0.4 +2.5 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.8 compare
root root sample 5; outgrowth in LB +0.6 +1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +1.5 compare