Fitness data for ABZR87_RS20810 in Ralstonia sp. UNC404CL21Col

2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
SEED: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
KEGG: 2-deoxy-D-gluconate 3-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source nitrogen source nitrate 5mM -1.4 -2.5 compare
carbon source Octanoic (C) -1.3 -2.1 compare
carbon source 4-Hydroxybenzoic Acid (C) -1.3 -1.5 compare
carbon source L-Glutamic (C) -0.9 -2.1 compare
carbon source Dodecandioic (C) -0.7 -2.1 compare
carbon source Octanoic (C) -0.6 -1.0 compare
carbon source Protocatechuic Acid (C) -0.6 -2.1 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.6 -1.1 compare
carbon source Pimelic (C) -0.6 -1.5 compare
root root EcoFAB sample 1; outgrowth in LB -0.6 -1.4 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -0.5 -0.8 compare
root root sample 5; outgrowth in LB -0.5 -0.9 compare
phage Ra1_0.01 -0.5 -1.8 compare
phage Ra3_0.01 -0.4 -1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +1.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +1.5 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.1 +1.5 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +1.3 +3.6 compare