group | condition | fitness | t score | |
carbon source | 1,2-Propanediol (C) | -0.1 | -0.5 | compare |
| 3-Hydroxypropionate (C) | +0.0 | +0.4 | compare |
| 4-Hydroxybenzoic Acid (C) | +0.0 | +0.3 | compare |
| Azelaic (C) | +0.2 | +1.0 | compare |
| Beta-alanine (C) | +0.2 | +1.8 | compare |
| Beta-alanine (C) | +0.1 | +0.9 | compare |
| D-Galactose (C) | +0.1 | +0.6 | compare |
| D-Galactose (C) | +0.1 | +0.9 | compare |
| Carbon source D-Glucose 10 mM | -0.2 | -1.5 | compare |
| Carbon source D-Glucose 10 mM | -0.2 | -1.6 | compare |
| D-Glucose (C) | +0.1 | +1.1 | compare |
| D-Glucose (C) | +0.2 | +1.4 | compare |
| D-Glucose (C) | +0.0 | +0.2 | compare |
| D-Glucose (C) | +0.2 | +1.4 | compare |
| D-Xylose (C) | +0.1 | +0.4 | compare |
| D-Xylose (C) | -0.0 | -0.4 | compare |
| D-Xylose (C) | -0.0 | -0.4 | compare |
| Disodium Glutarate (C) | +0.1 | +0.5 | compare |
| Disodium Glutarate (C) | -0.1 | -0.7 | compare |
| Dodecandioic (C) | +0.1 | +0.9 | compare |
| Dodecandioic (C) | +0.1 | +0.4 | compare |
| Glycerol (C) | +0.1 | +1.0 | compare |
| Glycerol (C) | +0.2 | +1.7 | compare |
| Heptanoic (C) | +0.1 | +0.9 | compare |
| Heptanoic (C) | +0.0 | +0.4 | compare |
| Hexanoic (C) | +0.1 | +0.4 | compare |
| Hexanoic (C) | +0.1 | +0.5 | compare |
| L-Glutamic (C) | -0.1 | -0.6 | compare |
| Lauric (C) | +0.0 | +0.1 | compare |
| Lauric (C) | +0.5 | +4.2 | compare |
| Lauric (C) | -0.0 | -0.0 | compare |
| Octanoic (C) | +0.5 | +2.7 | compare |
| Octanoic (C) | +0.2 | +1.2 | compare |
| Pimelic (C) | +0.2 | +1.7 | compare |
| Pimelic (C) | -0.0 | -0.4 | compare |
| Pimelic (C) | +0.1 | +0.6 | compare |
| Pimelic (C) | +0.1 | +0.8 | compare |
| Protocatechuic Acid (C) | +0.0 | +0.1 | compare |
| Protocatechuic Acid (C) | +0.1 | +0.6 | compare |
| Protocatechuic Acid (C) | +0.0 | +0.0 | compare |
| Protocatechuic Acid (C) | +0.1 | +0.6 | compare |
| Protocatechuic Acid (C) | +0.1 | +1.3 | compare |
| Sebacic (C) | +0.2 | +1.1 | compare |
| Sebacic (C) | -0.1 | -0.6 | compare |
| acetate (C) | +0.0 | +0.4 | compare |
| acetate (C) | +0.1 | +0.5 | compare |
| adipate (C) | +0.2 | +1.3 | compare |
| adipate (C) | +0.0 | +0.3 | compare |
| butyrate (C) | +0.1 | +0.7 | compare |
| butyrate (C) | +0.1 | +0.5 | compare |
| propionate (C) | +0.1 | +0.5 | compare |
| propionate (C) | +0.2 | +1.3 | compare |
| propionate (C) | +0.1 | +0.7 | compare |
| propionate (C) | +0.0 | +0.0 | compare |
| succinate (C) | +0.1 | +0.8 | compare |
| succinate (C) | +0.1 | +1.0 | compare |
| Suberic (C) | +0.1 | +0.7 | compare |
| Trans-2-methyl-2-butenoic (C) | +0.0 | +0.4 | compare |
| Trans-2-methyl-2-butenoic (C) | -0.0 | -0.0 | compare |
| Valeric (C) | +0.0 | +0.3 | compare |
| Valeric (C) | -0.0 | -0.1 | compare |
control | NoPredeControl | -0.1 | -1.2 | compare |
in planta | Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) | -0.0 | -0.2 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | -0.2 | -1.3 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | -0.0 | -0.3 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | +0.1 | +1.0 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | -0.2 | -1.4 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | -0.1 | -0.7 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | +0.1 | +0.7 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | -0.1 | -0.6 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | +0.1 | +0.7 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | +0.0 | +0.3 | compare |
| Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | -0.0 | -0.1 | compare |
micoeukaryotes | Acanthamoeba sp., muxed culture-1 | -0.1 | -0.9 | compare |
| Acanthamoeba sp., muxed culture-2 | +0.0 | +0.1 | compare |
| C.elegans, mixed culture-1 | -0.2 | -1.2 | compare |
| C.elegans, mixed culture-2 | -0.3 | -2.1 | compare |
| Dictyostellum sp.mixed culture-1 | -0.2 | -1.5 | compare |
| Dictyostellum sp.mixed culture-2 | -0.4 | -3.0 | compare |
nitrogen source | nitrogen source Ammonium chloride 20mM | -0.1 | -0.6 | compare |
| nitrogen source Ammonium chloride 20mM | -0.1 | -0.9 | compare |
| nitrogen source nitrate 5mM | +0.1 | +1.0 | compare |
| nitrogen source nitrate 5mM | -0.0 | -0.2 | compare |
| nitrogen source nitrate 20mM | -0.2 | -1.7 | compare |
| nitrogen source nitrate 20mM | -0.2 | -1.8 | compare |
| nitrogen source nitrite 0.5mM | +0.1 | +0.7 | compare |
| nitrogen source nitrite 0.5mM | -0.0 | -0.3 | compare |
| nitrogen source nitrite 1mM | +0.1 | +0.5 | compare |
| nitrogen source nitrite 5mM | -0.2 | -1.5 | compare |
| nitrogen source nitrite 5mM | -0.1 | -0.9 | compare |
no plant control | Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB | +0.2 | +0.9 | compare |
no_plant_rhizosphere | no_plant_rhizosphere sample 1; outgrowth in LB | -0.0 | -0.4 | compare |
| no_plant_rhizosphere sample 2; outgrowth in LB | +0.0 | +0.3 | compare |
| no_plant_rhizosphere sample 3; outgrowth in LB | +0.0 | +0.2 | compare |
no_plant_soil | no_plant_soil sample 1; outgrowth in LB | +0.0 | +0.2 | compare |
| no_plant_soil sample 2; outgrowth in LB | +0.1 | +0.5 | compare |
| no_plant_soil sample 3; outgrowth in LB | -0.0 | -0.3 | compare |
phage | Ra1_0.1 | -0.1 | -0.9 | compare |
| Ra1_0.01 | -0.0 | -0.3 | compare |
| Ra3_1 | +0.0 | +0.2 | compare |
| Ra3_0.1 | +0.1 | +0.4 | compare |
| Ra3_0.01 | +0.0 | +0.3 | compare |
rhizosphere | rhizosphere EcoFAB sample 1; outgrowth in LB | -0.0 | -0.1 | compare |
| rhizosphere EcoFAB sample 2; outgrowth in LB | -0.0 | -0.3 | compare |
| rhizosphere sample 1; outgrowth in LB | -0.0 | -0.2 | compare |
| rhizosphere sample 2; outgrowth in LB | +0.2 | +1.1 | compare |
| rhizosphere sample 3; outgrowth in LB | -0.0 | -0.1 | compare |
| rhizosphere sample 4; outgrowth in LB | -0.0 | -0.0 | compare |
| rhizosphere sample 5; outgrowth in LB | -0.1 | -1.1 | compare |
| rhizosphere sample 6; outgrowth in LB | -0.1 | -0.8 | compare |
| rhizosphere sample 7; outgrowth in LB | +0.1 | +0.5 | compare |
| rhizosphere sample 8; outgrowth in LB | +0.0 | +0.3 | compare |
| rhizosphere sample 9; outgrowth in LB | +0.0 | +0.1 | compare |
root | root EcoFAB sample 1; outgrowth in LB | +0.0 | +0.0 | compare |
| root EcoFAB sample 2; outgrowth in LB | -0.1 | -0.7 | compare |
| root sample 4; outgrowth in LB | -0.1 | -0.4 | compare |
| root sample 5; outgrowth in LB | -0.2 | -1.4 | compare |
| root sample 6; outgrowth in LB | -0.1 | -0.8 | compare |
soil | soil EcoFAB sample 1; outgrowth in LB | +0.1 | +0.8 | compare |
| soil EcoFAB sample 2; outgrowth in LB | -0.0 | -0.0 | compare |
| soil sample 1; outgrowth in LB | -0.0 | -0.3 | compare |
| soil sample 2; outgrowth in LB | -0.0 | -0.2 | compare |
| soil sample 3; outgrowth in LB | +0.0 | +0.1 | compare |
| soil sample 4; outgrowth in LB | -0.0 | -0.1 | compare |
| soil sample 5; outgrowth in LB | +0.1 | +1.1 | compare |
| soil sample 6; outgrowth in LB | -0.0 | -0.0 | compare |
| soil sample 7; outgrowth in LB | +0.0 | +0.0 | compare |
| soil sample 8; outgrowth in LB | +0.1 | +0.5 | compare |
| soil sample 9; outgrowth in LB | -0.1 | -1.0 | compare |