Fitness data for ABZR87_RS20160 in Ralstonia sp. UNC404CL21Col

OmpA family protein
SEED: Outer membrane protein assembly factor YaeT precursor
KEGG: chemotaxis protein MotB; OmpA-OmpF porin, OOP family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -3.3 -3.2 compare
rhizosphere rhizosphere sample 9; outgrowth in LB -2.2 -2.6 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -1.1 -1.9 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1 -1.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -2.5 compare
root root sample 6; outgrowth in LB -1.0 -1.6 compare
root root sample 4; outgrowth in LB -1.0 -1.8 compare
nitrogen source nitrogen source nitrite 5mM -0.9 -2.8 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.9 -0.9 compare
soil soil EcoFAB sample 1; outgrowth in LB -0.9 -1.1 compare
root root sample 5; outgrowth in LB -0.8 -1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 -1.7 compare
carbon source Octanoic (C) -0.8 -1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -2.7 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.7 -1.5 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -0.7 -1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.2 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.7 -1.3 compare
carbon source Disodium Glutarate (C) +0.7 +2.5 compare
carbon source 4-Hydroxybenzoic Acid (C) +1.0 +2.2 compare