Fitness data for ABZR87_RS19280 in Ralstonia sp. UNC404CL21Col

type III secretion system outer membrane ring subunit SctC
SEED: General secretion pathway protein D
KEGG: type III secretion protein SctC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source Octanoic (C) -0.4 -1.4 compare
carbon source D-Xylose (C) -0.3 -2.2 compare
carbon source Octanoic (C) -0.3 -0.9 compare
carbon source butyrate (C) -0.3 -1.6 compare
carbon source acetate (C) -0.2 -1.5 compare
carbon source propionate (C) +0.2 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.0 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.2 +1.2 compare
phage Ra1_0.1 +0.2 +1.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.3 +1.0 compare
soil soil sample 2; outgrowth in LB +0.3 +1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.6 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.4 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.8 compare
soil soil EcoFAB sample 1; outgrowth in LB +0.4 +1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.8 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +2.0 compare
root root EcoFAB sample 1; outgrowth in LB +0.5 +2.0 compare