Fitness data for ABZR87_RS18455 in Ralstonia sp. UNC404CL21Col

shikimate dehydrogenase
SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
KEGG: shikimate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Protocatechuic Acid (C) -0.7 -2.2 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -1.3 compare
phage Ra1_0.1 -0.7 -1.9 compare
root root sample 5; outgrowth in LB -0.6 -1.3 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 -1.4 compare
nitrogen source nitrogen source nitrate 20mM -0.6 -2.3 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5 -2.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 -1.0 compare
carbon source Trans-2-methyl-2-butenoic (C) -0.5 -2.2 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -0.5 -1.5 compare
carbon source acetate (C) -0.4 -1.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -1.2 compare
carbon source propionate (C) +0.4 +1.7 compare
carbon source Octanoic (C) +0.4 +0.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.4 +1.4 compare
rhizosphere rhizosphere sample 3; outgrowth in LB +0.5 +1.1 compare
nitrogen source nitrogen source nitrate 20mM +0.6 +2.2 compare
carbon source Octanoic (C) +0.6 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.2 +2.7 compare