Fitness data for ABZR87_RS18130 in Ralstonia sp. UNC404CL21Col

type III secretion system export apparatus subunit SctV
SEED: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
KEGG: type III secretion protein SctV

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
rhizosphere rhizosphere sample 9; outgrowth in LB -0.7 -2.7 compare
root root sample 6; outgrowth in LB -0.7 -2.3 compare
carbon source Octanoic (C) -0.6 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -1.8 compare
carbon source Octanoic (C) -0.5 -1.3 compare
root root EcoFAB sample 2; outgrowth in LB -0.5 -1.7 compare
rhizosphere rhizosphere sample 7; outgrowth in LB -0.4 -1.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -1.7 compare
root root sample 5; outgrowth in LB -0.4 -1.1 compare
carbon source Pimelic (C) -0.4 -1.8 compare
carbon source Protocatechuic Acid (C) -0.3 -1.2 compare
carbon source Lauric (C) -0.3 -1.8 compare
carbon source Sebacic (C) -0.3 -1.1 compare
carbon source Valeric (C) -0.3 -1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.3 +1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.3 +2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.4 +1.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +1.7 compare