Fitness data for ABZR87_RS15955 in Ralstonia sp. UNC404CL21Col

pyrroloquinoline quinone biosynthesis peptide chaperone PqqD
SEED: Coenzyme PQQ synthesis protein D
KEGG: pyrroloquinoline quinone biosynthesis protein D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source 4-Hydroxybenzoic Acid (C) -3.5 -2.1 compare
soil soil EcoFAB sample 1; outgrowth in LB -3.0 -2.1 compare
carbon source Sebacic (C) -2.6 -2.4 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -2.2 -2.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.7 -1.4 compare
root root sample 5; outgrowth in LB -1.6 -1.5 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -1.3 -1.7 compare
rhizosphere rhizosphere sample 6; outgrowth in LB -1.3 -1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.2 -1.1 compare
carbon source Octanoic (C) -1.2 -1.3 compare
carbon source butyrate (C) -1.2 -1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.1 -1.0 compare
carbon source Disodium Glutarate (C) -1.0 -2.1 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.9 -0.6 compare
carbon source Protocatechuic Acid (C) -0.9 -1.1 compare
nitrogen source nitrogen source nitrite 0.5mM +0.9 +1.0 compare
nitrogen source nitrogen source nitrate 5mM +1.0 +1.8 compare
rhizosphere rhizosphere sample 7; outgrowth in LB +1.0 +1.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.0 +0.9 compare
phage Ra3_1 +1.1 +3.3 compare