Fitness data for ABZR87_RS13190 in Ralstonia sp. UNC404CL21Col

presqualene diphosphate synthase HpnD
SEED: Phytoene synthase (EC 2.5.1.32)
KEGG: phytoene synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -2.6 compare
carbon source Heptanoic (C) -0.9 -4.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 -2.8 compare
carbon source Octanoic (C) -0.8 -2.4 compare
carbon source Heptanoic (C) -0.7 -2.5 compare
carbon source Octanoic (C) -0.7 -2.4 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.6 -1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.7 compare
root root sample 5; outgrowth in LB -0.5 -1.4 compare
carbon source Valeric (C) -0.5 -1.7 compare
carbon source acetate (C) -0.4 -2.0 compare
carbon source Dodecandioic (C) +0.4 +1.9 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +1.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.1 compare
soil soil EcoFAB sample 1; outgrowth in LB +0.5 +1.5 compare
rhizosphere rhizosphere sample 3; outgrowth in LB +0.6 +2.0 compare
phage Ra3_1 +0.6 +2.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +1.9 compare
carbon source Lauric (C) +0.8 +3.7 compare
phage Ra1_0.1 +0.9 +3.3 compare