Fitness data for ABZR87_RS12680 in Ralstonia sp. UNC404CL21Col

response regulator
SEED: Response regulator CitB of citrate metabolism
KEGG: two-component system, OmpR family, response regulator TctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Azelaic (C) -0.8 -1.4 compare
carbon source Octanoic (C) -0.7 -1.3 compare
carbon source Valeric (C) -0.7 -3.2 compare
phage Ra3_1 -0.7 -2.3 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -1.6 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.6 -1.3 compare
root root sample 6; outgrowth in LB -0.6 -1.1 compare
rhizosphere rhizosphere sample 9; outgrowth in LB -0.5 -1.3 compare
carbon source 3-Hydroxypropionate (C) -0.4 -2.2 compare
carbon source D-Glucose (C) -0.4 -1.9 compare
carbon source acetate (C) +0.4 +1.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +2.0 compare
rhizosphere rhizosphere sample 4; outgrowth in LB +0.6 +2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +1.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +1.1 compare
soil soil EcoFAB sample 1; outgrowth in LB +1.0 +2.2 compare
root root sample 5; outgrowth in LB +1.0 +3.0 compare