Fitness data for ABZR87_RS12300 in Ralstonia sp. UNC404CL21Col

muconolactone Delta-isomerase
SEED: Muconolactone isomerase (EC 5.3.3.4)
KEGG: muconolactone D-isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Octanoic (C) -2.3 -3.7 compare
carbon source Sebacic (C) -1.5 -3.2 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -1.2 -2.3 compare
carbon source Heptanoic (C) -1.0 -3.1 compare
carbon source propionate (C) -0.9 -3.6 compare
carbon source adipate (C) -0.8 -3.2 compare
carbon source Octanoic (C) -0.8 -1.3 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.7 -2.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.7 compare
soil soil sample 5; outgrowth in LB -0.7 -2.2 compare
soil soil sample 4; outgrowth in LB -0.7 -2.4 compare
nitrogen source nitrogen source nitrite 1mM -0.7 -2.0 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.7 -1.5 compare
root root sample 4; outgrowth in LB -0.7 -1.6 compare
phage Ra1_0.01 -0.6 -2.3 compare
carbon source butyrate (C) -0.6 -2.6 compare
root root sample 6; outgrowth in LB -0.6 -1.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.6 +2.0 compare