Fitness data for ABZR87_RS09970 in Ralstonia sp. UNC404CL21Col

sugar ABC transporter substrate-binding protein
SEED: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
KEGG: ribose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 0.5mM -0.9 -2.0 compare
carbon source Azelaic (C) -0.7 -1.2 compare
rhizosphere rhizosphere sample 9; outgrowth in LB -0.6 -1.7 compare
carbon source butyrate (C) -0.6 -1.8 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.5 -1.3 compare
carbon source Carbon source D-Glucose 10 mM -0.5 -2.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.4 compare
rhizosphere rhizosphere sample 5; outgrowth in LB -0.5 -2.1 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -0.5 -1.8 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.5 -1.1 compare
soil soil sample 9; outgrowth in LB -0.5 -2.0 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.6 +2.2 compare
root root sample 6; outgrowth in LB +0.6 +0.9 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +2.1 compare
carbon source Sebacic (C) +0.6 +1.2 compare
rhizosphere rhizosphere sample 3; outgrowth in LB +0.9 +1.7 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.1 +1.5 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +1.6 +5.5 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +1.6 +5.4 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +1.7 +3.7 compare