Fitness data for ABZR87_RS08605 in Ralstonia sp. UNC404CL21Col

pseudouridine synthase
SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal small subunit pseudouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
soil soil EcoFAB sample 1; outgrowth in LB -0.7 -2.0 compare
rhizosphere rhizosphere sample 9; outgrowth in LB -0.6 -2.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -2.0 compare
carbon source Octanoic (C) -0.4 -1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.5 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.2 compare
carbon source Protocatechuic Acid (C) -0.2 -1.5 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.2 -1.4 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 -0.8 compare
soil soil sample 2; outgrowth in LB -0.2 -1.4 compare
carbon source butyrate (C) +0.2 +1.3 compare
carbon source propionate (C) +0.2 +1.6 compare
carbon source Valeric (C) +0.2 +1.4 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.2 +1.4 compare
soil soil EcoFAB sample 2; outgrowth in LB +0.2 +1.1 compare
carbon source acetate (C) +0.3 +1.7 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +1.1 compare
carbon source adipate (C) +0.3 +2.3 compare
carbon source propionate (C) +0.4 +2.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.7 compare