Fitness data for ABZR87_RS08515 in Ralstonia sp. UNC404CL21Col

type II and III secretion system protein family protein
SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 0.5mM -0.8 -2.2 compare
nitrogen source nitrogen source nitrate 5mM -0.7 -2.8 compare
nitrogen source nitrogen source nitrate 20mM -0.5 -1.1 compare
soil soil sample 2; outgrowth in LB -0.5 -1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.3 compare
soil soil sample 6; outgrowth in LB -0.5 -1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -0.9 compare
carbon source Glycerol (C) -0.4 -1.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -1.5 compare
carbon source L-Glutamic (C) -0.4 -1.2 compare
phage Ra3_1 -0.4 -1.0 compare
carbon source Carbon source D-Glucose 10 mM +0.3 +1.5 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.3 +1.8 compare
carbon source butyrate (C) +0.3 +1.9 compare
carbon source Disodium Glutarate (C) +0.4 +1.6 compare
carbon source Octanoic (C) +0.5 +1.2 compare
micoeukaryotes C.elegans, mixed culture-2 +0.6 +3.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +0.7 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +1.1 compare
root root sample 6; outgrowth in LB +0.9 +2.3 compare