Fitness data for ABZR87_RS07780 in Ralstonia sp. UNC404CL21Col

tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
SEED: tRNA-i(6)A37 methylthiotransferase
KEGG: bifunctional enzyme involved in thiolation and methylation of tRNA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
rhizosphere rhizosphere sample 9; outgrowth in LB -0.9 -4.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -4.0 compare
carbon source Lauric (C) -0.5 -3.2 compare
phage Ra1_0.1 -0.5 -2.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -2.4 compare
phage Ra3_1 -0.5 -2.8 compare
rhizosphere rhizosphere sample 5; outgrowth in LB -0.4 -2.4 compare
phage Ra3_0.1 -0.4 -2.8 compare
phage Ra3_0.01 -0.4 -2.8 compare
root root EcoFAB sample 2; outgrowth in LB -0.4 -2.0 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.4 -1.8 compare
phage Ra1_0.01 -0.4 -2.7 compare
root root sample 6; outgrowth in LB -0.4 -1.6 compare
micoeukaryotes C.elegans, mixed culture-2 -0.4 -2.6 compare
soil soil sample 6; outgrowth in LB -0.4 -2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -2.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.4 -1.9 compare
nitrogen source nitrogen source nitrite 1mM +0.4 +2.5 compare
carbon source Octanoic (C) +0.6 +2.2 compare
carbon source Octanoic (C) +0.7 +2.5 compare