Fitness data for ABZR87_RS06635 in Ralstonia sp. UNC404CL21Col

sigma-54 dependent transcriptional regulator
SEED: Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake
KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source succinate (C) -3.3 -7.0 compare
carbon source Octanoic (C) -1.8 -3.8 compare
carbon source succinate (C) -1.2 -4.8 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.9 -3.1 compare
soil soil EcoFAB sample 1; outgrowth in LB -0.6 -1.3 compare
carbon source Azelaic (C) -0.5 -1.0 compare
carbon source Heptanoic (C) -0.5 -2.5 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.5 -2.5 compare
carbon source Heptanoic (C) -0.5 -1.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -1.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +1.4 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.4 +1.8 compare
soil soil sample 6; outgrowth in LB +0.5 +2.3 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.5 +1.7 compare
carbon source Sebacic (C) +0.5 +1.4 compare
root root sample 4; outgrowth in LB +0.6 +1.8 compare
rhizosphere rhizosphere sample 9; outgrowth in LB +0.6 +2.3 compare
micoeukaryotes C.elegans, mixed culture-2 +0.6 +2.7 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.7 +1.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.8 +3.8 compare